Genetic Epidemiology Workshop [August 2010]

Topics for 2010 Workshop

Website: OpenMx
Text: Methodology for Genetic Studies of Twins and Families by Neale & Cardon, 1992 revision PDF of Neale & Maes book.
Manual: Mx: Statistical Modeling by Neale, Boker, Xie & Maes, 2006 PDF of Mx Manual.

NumberLecture TopicPresentation/MediaNotes and Examples
01Introduction to RDr. York’s R FilesDr. York’s Session 11
R for OpenMx Reference Key
02Introduction to OpenMxOpenMx SMEP Presentation
OpenMx Intro Presentation
Intro Scripts
OpenMx Reference Key
First OpenMx script
03Matrix Algebra & OptimizationMatrix Algebra
MatrixAlgebraExercises
Matrix Algebra Exercises
04Means & Variance ModelingUnivariate Saturated
Bivariate Saturated
05Saturated Twin ModelingUnivariate Twin Saturated -Matrix Raw Continuous
Univariate Twin Saturated -Matrix Raw Binary
Univariate Twin Saturated -Matrix Raw Ordinal
06Univariate Twin ModelingUnivariate Twin ACE -Matrix Raw Continuous
Univariate Twin ACE -Matrix Raw Binary
Univariate Twin ACE -Matrix Raw Ordinal
07Heterogeneity Twin ModelingACE 5 group graph
ADE 5 group graph
Heterogeneity Twin Quant Diff [same sex] -Matrix Raw Continuous
Heterogeneity Twin Quant Diff [same sex] -Matrix Raw Ordinal
Heterogeneity Twin Quant/Qual Diff [SS+OS] -Matrix Raw Continuous
Heterogeneity Twin Quant/Qual Diff [SS+OS] -Matrix Raw Ordinal
08Moderated Twin Modeling
09Bivariate Twin Modeling
10Multivariate Twin ModelingIP graph
CP graph
Multivariate Twin ACE -Matrix Raw Continuous
11Helper FunctionsGenetic Epidemiology Helper FunctionsGen Epi Helper Functions
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