AGES Workshop – Oct. 26-30, 2015

Multivariate Genetic Modeling

TimeSpeakerTopicPresentationNotes/Examples
09:00 – 10:00Kenneth S. KendlerStatistical Genetics of Substance Use (SU)/td>Introduction
10:00 – 10:30Timothy P. York / Elizabeth Prom-WormleyReview 1: R & OpenMxR_intro
ACE_BMI.Rdata
ACE_BMI.Rmd
11:00 – 12:30Hermine H. Maes / Timothy C. BatesReview 2: Genetic Factor Analysis Multivariate Sex LimitationMultivariateGeneticAnalysistwinMulSatAceCon.R
twinHetMulAceCon.R
usski.rec
01:30 – 03:00Timothy Brick / Joshua N. PritikinFundamentals of Optimization & Model FittingOptimization-OpenMxTwinWorkshop2015
opt.pdf
tour.R
03:30 – 05:00Nathan A. GillespieDirection of Causation & Comorbidity Models Mutualism, Sibling / Spousal InteractionDirectionOfCausationNU321_cannabis_psychosis.sav
Gillespie_DOC_modelling.R
polychoricMatrix3.R

Measurement & Phenotyping

TimeSpeakerTopicPresentationNotes/Examples
09:00 – 10:30Cristopher R. Estabrook / Joshua PritikinSum & Factor Scores / Item Response ModelsFactorScoringAndIRT2015.pdf
pritikin-schmidt-20151022.pdf
factorScores2015Oct27.R
agesNICdata.txt
nsduh_small.csv
11:00 – 12:30Michael C. NealeMeasurement InvarianceMeasurementInvariancegetFactorScoresNew3.R
mi_modtest1.R
mitest_can.R
nsduh090913.txt
01:30 – 03:00Michael D. HunterBehavior Genetic Models in Multilevel ClothingMultilevelBGbuildingBlocks.R
03:30 – 05:00Timothy BrickLatent Class Analysis & Factor Mixture ModelHeterogeneitySearchLCA-Basic.R
Data_Oz_CAN_Sim.dat
SEMtree-Basic.R
waisr-transformed.txt

Family Processes

TimeSpeakerTopicPresentationNotes/Examples
08:00 – 09:00Timothy P. YorkFunctions in RAGES2015Functions.R
09:00 – 10:30Tim Bigdeli / Benjamin M. NealeIntroduction to Modeling Genomewide DataBiometrical Model
11:00 – 12:30Lindon J. EavesGenetic Relationship Matrices TheoryGCTA Maternal Effects
11:00 – 12:30Brad Verhulst / Sarah MedlandSibling Models and Age Difference ModerationKirkpatrick_AGES2015–mxGREML.pptxTaSsim1.R
CondenseSlotsDemo.R
AGES2015GRM.grm.id
AGES2015GRM.grm.bin
MAGES2015GRM.grm.N.bin
GREMLphenodata.csv
AGES2015FactorModGRM.grm.id
AGES2015FactorModGRM.grm.bin
AGES2015FactorModGRM.grm.N.bin
GREMLFactorModData.csv
03:30 – 05:00Benjamin M. NealeSNP-based Heritability Estimating – Alternative MethodsAGES_LDSC.pptx

GxE Interaction

TimeSpeakerTopicPresentationNotes/Examples
09:00 – 10:30Bradley VerhulstGenotype Environment InteractionNIDA GxE
11:00 – 12:30Timothy C. BatesModeration of ACE in Twin Designs
01:30 – 03:00Roseann Peterson / Benjamin M. NealeMediation / Mendelian Randomization
03:30 – 05:00Lindon J. EavesFuture Directions
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